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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs78463142 chr21:47964481 A/G 1.85E-5 500 37.42 37.33 6.87 KM Plot
KIRC rs7849083 chr9:130710973 C/T 9.21E-5 501 1.8 29.27 38 KM Plot
KIRC rs78549512 chr16:2935503 A/G 2.37E-5 506 36.12 42.2 3.37 KM Plot
KIRC rs78618215 chr8:17309727 A/T 1.54E-8 503 37.03 41 3.1 KM Plot
KIRC rs78654337 chr21:47824372 A/G 4.6E-5 501 36.97 46.17 6.87 KM Plot
KIRC rs78790313 chr16:2956228 A/G 1.35E-5 500 37.03 38.93 9.37 KM Plot
KIRC rs78861972 chr2:67598584 A/C 2.31E-7 506 37.33 37.73 2.03 KM Plot
KIRC rs7896382 chr10:29682041 C/T 9.66E-5 504 37.35 37.7 13.87 KM Plot
KIRC rs79000807 chr11:1551312 A/G 8.23E-5 508 37.4 37.37 5.47 KM Plot
KIRC rs79063553 chr2:67587887 A/T 2.29E-7 505 37.35 37.73 2.03 KM Plot
KIRC rs79089926 chr3:48348564 A/C 7.7E-6 505 37.6 37.77 19.13 KM Plot
KIRC rs79100421 chr21:47969962 T/C 2.71E-5 498 37.2 37.33 6.87 KM Plot
KIRC rs79111847 chr8:67271690 C/T 0 506 37.47 35.7 0.6 KM Plot
KIRC rs7912777 chr10:90658059 T/C 5.02E-5 486 37.5 32.65 42.9 KM Plot
KIRC rs79225202 chr11:34797803 A/C 9.4E-8 504 37.5 32.23 3.3 KM Plot